Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.2■□□□□ 0.18
Sim1Q61045 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.2■□□□□ 0.18
Sim1Q61045 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.2■□□□□ 0.18
Sim1Q61045 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Gm2213-201ENSMUST00000197485 688 ntBASIC16.2■□□□□ 0.18
Sim1Q61045 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.2■□□□□ 0.18
Sim1Q61045 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sim1Q61045 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.2■□□□□ 0.18
Sim1Q61045 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sim1Q61045 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sim1Q61045 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sim1Q61045 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sim1Q61045 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sim1Q61045 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sim1Q61045 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Sim1Q61045 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Gm13186-201ENSMUST00000118031 316 ntBASIC16.19■□□□□ 0.18
Sim1Q61045 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Gm11594-201ENSMUST00000122313 162 ntBASIC16.19■□□□□ 0.18
Sim1Q61045 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.19■□□□□ 0.18
Sim1Q61045 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sim1Q61045 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.18■□□□□ 0.18
Sim1Q61045 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.18■□□□□ 0.18
Sim1Q61045 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.18■□□□□ 0.18
Sim1Q61045 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.18■□□□□ 0.18
Sim1Q61045 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.18■□□□□ 0.18
Sim1Q61045 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sim1Q61045 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sim1Q61045 Rps4l-201ENSMUST00000071745 943 ntBASIC16.18■□□□□ 0.18
Sim1Q61045 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim1Q61045 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sim1Q61045 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.17■□□□□ 0.18
Sim1Q61045 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.17■□□□□ 0.18
Sim1Q61045 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.17■□□□□ 0.18
Sim1Q61045 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim1Q61045 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sim1Q61045 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms