Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scarb1Q61009 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.85□□□□□ -0.19
Scarb1Q61009 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.85□□□□□ -0.19
Scarb1Q61009 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.85□□□□□ -0.19
Scarb1Q61009 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scarb1Q61009 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Gm11249-201ENSMUST00000117071 859 ntBASIC13.84□□□□□ -0.19
Scarb1Q61009 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Gm27405-201ENSMUST00000184201 112 ntBASIC13.84□□□□□ -0.19
Scarb1Q61009 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Gm18025-201ENSMUST00000221733 862 ntBASIC13.84□□□□□ -0.19
Scarb1Q61009 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scarb1Q61009 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.84□□□□□ -0.19
Scarb1Q61009 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scarb1Q61009 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Scarb1Q61009 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scarb1Q61009 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scarb1Q61009 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scarb1Q61009 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.83□□□□□ -0.2
Scarb1Q61009 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.83□□□□□ -0.2
Scarb1Q61009 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.83□□□□□ -0.2
Scarb1Q61009 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scarb1Q61009 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Gm12896-201ENSMUST00000118430 226 ntBASIC13.83□□□□□ -0.2
Scarb1Q61009 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scarb1Q61009 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.83□□□□□ -0.2
Scarb1Q61009 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Scarb1Q61009 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scarb1Q61009 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scarb1Q61009 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scarb1Q61009 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scarb1Q61009 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scarb1Q61009 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scarb1Q61009 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scarb1Q61009 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms