Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Xrcc1Q60596 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Xrcc1Q60596 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Xrcc1Q60596 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Xrcc1Q60596 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Gm15794-201ENSMUST00000120182 631 ntBASIC15.65■□□□□ 0.1
Xrcc1Q60596 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Gm27742-201ENSMUST00000184667 60 ntBASIC15.65■□□□□ 0.1
Xrcc1Q60596 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.65■□□□□ 0.1
Xrcc1Q60596 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Xrcc1Q60596 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.65■□□□□ 0.1
Xrcc1Q60596 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Xrcc1Q60596 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.64■□□□□ 0.1
Xrcc1Q60596 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.64■□□□□ 0.09
Xrcc1Q60596 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Xrcc1Q60596 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.63■□□□□ 0.09
Xrcc1Q60596 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Olfr129-201ENSMUST00000122318 993 ntBASIC15.63■□□□□ 0.09
Xrcc1Q60596 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Xrcc1Q60596 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.62■□□□□ 0.09
Xrcc1Q60596 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.62■□□□□ 0.09
Xrcc1Q60596 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Xrcc1Q60596 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms