Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shroom1Q5SX79 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.37■□□□□ 0.37
Shroom1Q5SX79 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Gm5864-201ENSMUST00000202263 970 ntBASIC17.37■□□□□ 0.37
Shroom1Q5SX79 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shroom1Q5SX79 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm10052-201ENSMUST00000168019 960 ntBASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm44430-201ENSMUST00000203376 995 ntBASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Gm7729-201ENSMUST00000050143 801 ntBASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shroom1Q5SX79 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.35■□□□□ 0.37
Shroom1Q5SX79 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.35■□□□□ 0.37
Shroom1Q5SX79 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Shroom1Q5SX79 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shroom1Q5SX79 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms