Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav6-2Q5R1I4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Gm7506-201ENSMUST00000207758 815 ntBASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav6-2Q5R1I4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm1401-201ENSMUST00000122048 772 ntBASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-2Q5R1I4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav6-2Q5R1I4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Trav6-2Q5R1I4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-2Q5R1I4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-2Q5R1I4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm4535-201ENSMUST00000182274 558 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-2Q5R1I4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms