Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7-2Q5R1I3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7-2Q5R1I3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7-2Q5R1I3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trav7-2Q5R1I3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms