Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-4Q5R1I0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Gm17971-201ENSMUST00000190239 806 ntBASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-4Q5R1I0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-4Q5R1I0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Gm13312-201ENSMUST00000119631 718 ntBASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6d-4Q5R1I0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Gm12895-201ENSMUST00000122214 226 ntBASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Rprl3-201ENSMUST00000157400 290 ntBASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6d-4Q5R1I0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms