Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav5d-4Q5R1F6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Gm18959-201ENSMUST00000208954 655 ntBASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Gm18115-201ENSMUST00000221209 621 ntBASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5d-4Q5R1F6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5d-4Q5R1F6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5d-4Q5R1F6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5d-4Q5R1F6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5d-4Q5R1F6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5d-4Q5R1F6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5d-4Q5R1F6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Gm45058-201ENSMUST00000205810 766 ntBASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5d-4Q5R1F6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms