Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm12382-201ENSMUST00000122005 922 ntBASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm13158-201ENSMUST00000122007 736 ntBASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm10517-202ENSMUST00000192970 758 ntBASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm42545-201ENSMUST00000202755 922 ntBASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav15-1-dv6-1Q5R1D2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm27000-201ENSMUST00000182943 842 ntBASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav15-1-dv6-1Q5R1D2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms