Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav3-3Q5R1C3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav3-3Q5R1C3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Gm10493-201ENSMUST00000097270 612 ntBASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav3-3Q5R1C3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav3-3Q5R1C3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav3-3Q5R1C3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms