Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gm36967-201ENSMUST00000193814 266 ntBASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav8d-2Q5R1B6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Gm17271-201ENSMUST00000165535 355 ntBASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav8d-2Q5R1B6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav8d-2Q5R1B6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Gm14701-201ENSMUST00000117156 348 ntBASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav8d-2Q5R1B6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Gm18622-201ENSMUST00000219361 595 ntBASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav8d-2Q5R1B6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms