Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf43Q5NCP0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Gm4535-201ENSMUST00000182274 558 ntBASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Psmb5-202ENSMUST00000227257 622 ntBASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Gm10355-201ENSMUST00000097146 517 ntBASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf43Q5NCP0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Gm11594-201ENSMUST00000122313 162 ntBASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Gm25745-201ENSMUST00000174945 133 ntBASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf43Q5NCP0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Gm5264-201ENSMUST00000190584 848 ntBASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Gm2213-201ENSMUST00000197485 688 ntBASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf43Q5NCP0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms