Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Gm43799-201ENSMUST00000201845 579 ntBASIC16.22■□□□□ 0.19
Scn2bQ56A07 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.22■□□□□ 0.19
Scn2bQ56A07 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn2bQ56A07 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.21■□□□□ 0.19
Scn2bQ56A07 Gm11539-201ENSMUST00000119837 557 ntBASIC16.21■□□□□ 0.19
Scn2bQ56A07 Gm13436-201ENSMUST00000120418 567 ntBASIC16.21■□□□□ 0.19
Scn2bQ56A07 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.21■□□□□ 0.19
Scn2bQ56A07 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scn2bQ56A07 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scn2bQ56A07 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.18
Scn2bQ56A07 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.21■□□□□ 0.18
Scn2bQ56A07 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Scn2bQ56A07 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.2■□□□□ 0.18
Scn2bQ56A07 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.2■□□□□ 0.18
Scn2bQ56A07 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scn2bQ56A07 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.2■□□□□ 0.18
Scn2bQ56A07 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scn2bQ56A07 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.19■□□□□ 0.18
Scn2bQ56A07 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.19■□□□□ 0.18
Scn2bQ56A07 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.19■□□□□ 0.18
Scn2bQ56A07 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Gm18958-201ENSMUST00000174258 762 ntBASIC16.19■□□□□ 0.18
Scn2bQ56A07 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn2bQ56A07 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.18■□□□□ 0.18
Scn2bQ56A07 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm6433-201ENSMUST00000118634 875 ntBASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm13559-201ENSMUST00000120476 863 ntBASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn2bQ56A07 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms