Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rc3h1Q4VGL6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rc3h1Q4VGL6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm25745-201ENSMUST00000174945 133 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44357-201ENSMUST00000195897 142 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm19658-201ENSMUST00000196231 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44367-201ENSMUST00000196836 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44350-201ENSMUST00000197197 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44390-201ENSMUST00000197533 144 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44313-201ENSMUST00000198018 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44486-201ENSMUST00000198508 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44314-201ENSMUST00000199263 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44394-201ENSMUST00000199558 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44484-201ENSMUST00000199873 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44466-201ENSMUST00000200264 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44359-201ENSMUST00000200671 138 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm44487-201ENSMUST00000205145 325 ntBASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rc3h1Q4VGL6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Gm6296-201ENSMUST00000222599 943 ntBASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rc3h1Q4VGL6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Gm7506-201ENSMUST00000207758 815 ntBASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rc3h1Q4VGL6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rc3h1Q4VGL6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Rc3h1Q4VGL6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rc3h1Q4VGL6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rc3h1Q4VGL6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms