Protein–RNA interactions for Protein: Q4VA36

Ccdc84, Coiled-coil domain-containing protein 84, mousemouse

Known RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84Q4VA36 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc84Q4VA36 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc84Q4VA36 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc84Q4VA36 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Gm5264-201ENSMUST00000190584 848 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Gm15590-201ENSMUST00000078419 552 ntBASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc84Q4VA36 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc84Q4VA36 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc84Q4VA36 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc84Q4VA36 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc84Q4VA36 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms