Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Gm18622-201ENSMUST00000219361 595 ntBASIC9.71□□□□□ -0.86
Herc2Q4U2R1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC9.71□□□□□ -0.86
Herc2Q4U2R1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm24694-201ENSMUST00000180054 110 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm27663-201ENSMUST00000184839 110 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm4959-201ENSMUST00000197271 1044 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 CT030684.1-201ENSMUST00000227292 914 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 AC114585.2-202ENSMUST00000228094 426 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm17837-201ENSMUST00000186435 985 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm25144-201ENSMUST00000179561 110 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm25352-201ENSMUST00000179815 110 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm43182-201ENSMUST00000199476 2528 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm11185-201ENSMUST00000117732 1007 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.7□□□□□ -0.86
Herc2Q4U2R1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Herc2Q4U2R1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.69□□□□□ -0.86
Herc2Q4U2R1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Fcho2-208ENSMUST00000224992 2964 ntBASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Herc2Q4U2R1 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Gm18057-201ENSMUST00000208220 503 ntBASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Gm9063-201ENSMUST00000223299 582 ntBASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Gm6858-201ENSMUST00000208582 1468 ntBASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Gm9385-201ENSMUST00000117563 472 ntBASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Mir8112-201ENSMUST00000184382 131 ntBASIC9.68□□□□□ -0.86
Herc2Q4U2R1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms