Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Actl10-202ENSMUST00000226583 1501 ntBASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syne3Q4FZC9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm26039-201ENSMUST00000158152 144 ntBASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm21559-201ENSMUST00000220638 855 ntBASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm8587-201ENSMUST00000076538 843 ntBASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.38■□□□□ 0.37
Syne3Q4FZC9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Syne3Q4FZC9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Syne3Q4FZC9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Syne3Q4FZC9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms