Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shank3Q4ACU6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Gm44492-201ENSMUST00000197012 141 ntBASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shank3Q4ACU6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Gm27494-201ENSMUST00000184735 189 ntBASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Gm9682-201ENSMUST00000197505 556 ntBASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shank3Q4ACU6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Gm37171-201ENSMUST00000192636 1185 ntBASIC20.28■□□□□ 0.84
Shank3Q4ACU6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shank3Q4ACU6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shank3Q4ACU6 Gm8344-201ENSMUST00000119813 856 ntBASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Gm5177-201ENSMUST00000183092 997 ntBASIC20.27■□□□□ 0.83
Shank3Q4ACU6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shank3Q4ACU6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shank3Q4ACU6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank3Q4ACU6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC20.24■□□□□ 0.83
Shank3Q4ACU6 Gm45612-201ENSMUST00000211320 160 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms