Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ckap2Q3V1H1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ckap2Q3V1H1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Gm33142-201ENSMUST00000193913 867 ntBASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ckap2Q3V1H1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ckap2Q3V1H1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ckap2Q3V1H1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ckap2Q3V1H1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ckap2Q3V1H1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Gm27742-201ENSMUST00000184667 60 ntBASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ckap2Q3V1H1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Olfr129-201ENSMUST00000122318 993 ntBASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ckap2Q3V1H1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms