Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm29609Q3UU56 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Gm45328-201ENSMUST00000210942 917 ntBASIC17.16■□□□□ 0.34
Gm29609Q3UU56 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm29609Q3UU56 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Gm43575-201ENSMUST00000196420 516 ntBASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm29609Q3UU56 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.14■□□□□ 0.34
Gm29609Q3UU56 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm29609Q3UU56 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm29609Q3UU56 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms