Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkl5Q3UTQ8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkl5Q3UTQ8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Gm36967-201ENSMUST00000193814 266 ntBASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkl5Q3UTQ8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkl5Q3UTQ8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Mir7071-201ENSMUST00000184847 69 ntBASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkl5Q3UTQ8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkl5Q3UTQ8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms