Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SfswapQ3USH5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.47■□□□□ 0.71
SfswapQ3USH5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.47■□□□□ 0.71
SfswapQ3USH5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SfswapQ3USH5 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.46■□□□□ 0.71
SfswapQ3USH5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.46■□□□□ 0.71
SfswapQ3USH5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SfswapQ3USH5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.45■□□□□ 0.7
SfswapQ3USH5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.44■□□□□ 0.7
SfswapQ3USH5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.44■□□□□ 0.7
SfswapQ3USH5 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.44■□□□□ 0.7
SfswapQ3USH5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SfswapQ3USH5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.43■□□□□ 0.7
SfswapQ3USH5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SfswapQ3USH5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SfswapQ3USH5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.42■□□□□ 0.7
SfswapQ3USH5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SfswapQ3USH5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms