Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Naf1Q3UMQ8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Naf1Q3UMQ8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Naf1Q3UMQ8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Naf1Q3UMQ8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Naf1Q3UMQ8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Naf1Q3UMQ8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Naf1Q3UMQ8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Naf1Q3UMQ8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Naf1Q3UMQ8 Rprl3-201ENSMUST00000157400 290 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms