Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pdlim7Q3TJD7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pdlim7Q3TJD7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Mir8117-201ENSMUST00000184773 107 ntBASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pdlim7Q3TJD7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pdlim7Q3TJD7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Gm9172-201ENSMUST00000212092 954 ntBASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pdlim7Q3TJD7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pdlim7Q3TJD7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pdlim7Q3TJD7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms