Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.2■□□□□ 0.34
Cul4aQ3TCH7 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cul4aQ3TCH7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cul4aQ3TCH7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms