Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Ush2AQ2QI47 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ush2AQ2QI47 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ush2AQ2QI47 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Ush2AQ2QI47 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm27838-201ENSMUST00000184829 128 ntBASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm13294-201ENSMUST00000121757 1330 ntBASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Ush2AQ2QI47 Gm6858-201ENSMUST00000208582 1468 ntBASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gm5366-201ENSMUST00000215494 1338 ntBASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gm18622-201ENSMUST00000219361 595 ntBASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Gm6018-201ENSMUST00000216090 1306 ntBASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Ush2AQ2QI47 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Gm9194-201ENSMUST00000220749 1447 ntBASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Ush2AQ2QI47 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm15824-201ENSMUST00000119516 955 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm9385-201ENSMUST00000117563 472 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm18057-201ENSMUST00000208220 503 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm6218-201ENSMUST00000219812 628 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm18018-201ENSMUST00000198273 408 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms