Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm27525-201ENSMUST00000184465 107 ntBASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Grk6-207ENSMUST00000225925 2769 ntBASIC14.65□□□□□ -0.06
Pkd1l3Q2EG98 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Gm6376-201ENSMUST00000209407 580 ntBASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pkd1l3Q2EG98 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Gm7506-201ENSMUST00000207758 815 ntBASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pkd1l3Q2EG98 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 AW822252-206ENSMUST00000208904 237 ntBASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pkd1l3Q2EG98 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms