Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Gm13597-201ENSMUST00000121239 375 ntBASIC12.02□□□□□ -0.49
Hspg2Q05793 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.02□□□□□ -0.49
Hspg2Q05793 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.02□□□□□ -0.49
Hspg2Q05793 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hspg2Q05793 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Hspg2Q05793 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.01□□□□□ -0.49
Hspg2Q05793 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.01□□□□□ -0.49
Hspg2Q05793 Gm17968-201ENSMUST00000194902 784 ntBASIC12.01□□□□□ -0.49
Hspg2Q05793 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Hspg2Q05793 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Mir6977-201ENSMUST00000184960 64 ntBASIC12.01□□□□□ -0.49
Hspg2Q05793 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.01□□□□□ -0.49
Hspg2Q05793 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hspg2Q05793 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hspg2Q05793 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Hspg2Q05793 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12□□□□□ -0.49
Hspg2Q05793 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Gm11620-201ENSMUST00000118770 1845 ntBASIC12□□□□□ -0.49
Hspg2Q05793 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12□□□□□ -0.49
Hspg2Q05793 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12□□□□□ -0.49
Hspg2Q05793 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Gm2423-201ENSMUST00000074863 733 ntBASIC12□□□□□ -0.49
Hspg2Q05793 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Hspg2Q05793 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12□□□□□ -0.49
Hspg2Q05793 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12□□□□□ -0.49
Hspg2Q05793 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12□□□□□ -0.49
Hspg2Q05793 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Hspg2Q05793 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12□□□□□ -0.49
Hspg2Q05793 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Hspg2Q05793 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.99□□□□□ -0.49
Hspg2Q05793 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Gm11764-201ENSMUST00000120221 623 ntBASIC11.99□□□□□ -0.49
Hspg2Q05793 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hspg2Q05793 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms