Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sox9Q04887 Gm5745-201ENSMUST00000183748 313 ntBASIC16.85■□□□□ 0.29
Sox9Q04887 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Sox9Q04887 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Sox9Q04887 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Sox9Q04887 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox9Q04887 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox9Q04887 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sox9Q04887 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.84■□□□□ 0.29
Sox9Q04887 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox9Q04887 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox9Q04887 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Gm20949-201ENSMUST00000206478 952 ntBASIC16.84■□□□□ 0.29
Sox9Q04887 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox9Q04887 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Sox9Q04887 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sox9Q04887 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox9Q04887 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.83■□□□□ 0.29
Sox9Q04887 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox9Q04887 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Sox9Q04887 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox9Q04887 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox9Q04887 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox9Q04887 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox9Q04887 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Sox9Q04887 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox9Q04887 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox9Q04887 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Gm9172-201ENSMUST00000212092 954 ntBASIC16.83■□□□□ 0.28
Sox9Q04887 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.83■□□□□ 0.28
Sox9Q04887 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox9Q04887 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sox9Q04887 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sox9Q04887 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.83■□□□□ 0.28
Sox9Q04887 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox9Q04887 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox9Q04887 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox9Q04887 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Sox9Q04887 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox9Q04887 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.81■□□□□ 0.28
Sox9Q04887 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.81■□□□□ 0.28
Sox9Q04887 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.81■□□□□ 0.28
Sox9Q04887 Gm11764-201ENSMUST00000120221 623 ntBASIC16.81■□□□□ 0.28
Sox9Q04887 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.81■□□□□ 0.28
Sox9Q04887 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Sox9Q04887 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox9Q04887 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox9Q04887 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms