Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacna1sQ02789 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.65■□□□□ 0.9
Cacna1sQ02789 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1sQ02789 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Gm5866-201ENSMUST00000177881 973 ntBASIC20.64■□□□□ 0.9
Cacna1sQ02789 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.64■□□□□ 0.9
Cacna1sQ02789 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacna1sQ02789 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1sQ02789 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22065-201ENSMUST00000103753 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22066-201ENSMUST00000103761 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24932-201ENSMUST00000103763 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24115-201ENSMUST00000103799 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22190-201ENSMUST00000103827 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22191-201ENSMUST00000103831 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24721-201ENSMUST00000103849 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm28018-201ENSMUST00000103869 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm26399-201ENSMUST00000103937 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25349-201ENSMUST00000177728 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm23616-201ENSMUST00000177797 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25871-201ENSMUST00000177816 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24752-201ENSMUST00000178240 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24496-201ENSMUST00000178287 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25649-201ENSMUST00000178476 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25548-201ENSMUST00000178681 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm23147-201ENSMUST00000178841 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm26095-201ENSMUST00000179270 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22171-201ENSMUST00000179283 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm23936-201ENSMUST00000179354 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm22619-201ENSMUST00000179516 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25255-201ENSMUST00000179579 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24755-201ENSMUST00000179691 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm26506-201ENSMUST00000179692 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm25086-201ENSMUST00000179931 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm23243-201ENSMUST00000180047 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24659-201ENSMUST00000180212 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm24169-201ENSMUST00000180244 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm23689-201ENSMUST00000180354 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm27301-201ENSMUST00000184012 127 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm27359-201ENSMUST00000184153 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm27785-201ENSMUST00000184268 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm27466-201ENSMUST00000184396 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm27703-201ENSMUST00000184836 110 ntBASIC20.63■□□□□ 0.89
Cacna1sQ02789 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacna1sQ02789 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cacna1sQ02789 Gm18489-201ENSMUST00000172565 551 ntBASIC20.62■□□□□ 0.89
Cacna1sQ02789 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacna1sQ02789 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1sQ02789 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1sQ02789 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Cacna1sQ02789 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms