Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.94■□□□□ 0.3
IhhP97812 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.94■□□□□ 0.3
IhhP97812 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.94■□□□□ 0.3
IhhP97812 Gm27741-201ENSMUST00000185060 237 ntBASIC16.94■□□□□ 0.3
IhhP97812 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.94■□□□□ 0.3
IhhP97812 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
IhhP97812 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IhhP97812 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.93■□□□□ 0.3
IhhP97812 Gm15165-201ENSMUST00000118140 502 ntBASIC16.93■□□□□ 0.3
IhhP97812 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.93■□□□□ 0.3
IhhP97812 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
IhhP97812 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.93■□□□□ 0.3
IhhP97812 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.93■□□□□ 0.3
IhhP97812 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
IhhP97812 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IhhP97812 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
IhhP97812 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.92■□□□□ 0.3
IhhP97812 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.92■□□□□ 0.3
IhhP97812 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.92■□□□□ 0.3
IhhP97812 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.92■□□□□ 0.3
IhhP97812 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Gm27459-201ENSMUST00000184860 107 ntBASIC16.92■□□□□ 0.3
IhhP97812 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.92■□□□□ 0.3
IhhP97812 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
IhhP97812 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IhhP97812 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.91■□□□□ 0.3
IhhP97812 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IhhP97812 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IhhP97812 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.91■□□□□ 0.3
IhhP97812 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IhhP97812 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IhhP97812 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IhhP97812 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IhhP97812 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Gm7153-201ENSMUST00000117092 455 ntBASIC16.9■□□□□ 0.3
IhhP97812 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.9■□□□□ 0.3
IhhP97812 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.9■□□□□ 0.3
IhhP97812 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
IhhP97812 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IhhP97812 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IhhP97812 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms