Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.43■□□□□ 0.86
Smarcc1P97496 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.43■□□□□ 0.86
Smarcc1P97496 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.43■□□□□ 0.86
Smarcc1P97496 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.43■□□□□ 0.86
Smarcc1P97496 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Smarcc1P97496 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcc1P97496 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.42■□□□□ 0.86
Smarcc1P97496 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarcc1P97496 Mir3113-201ENSMUST00000175478 76 ntBASIC20.42■□□□□ 0.86
Smarcc1P97496 Gm8969-201ENSMUST00000199694 526 ntBASIC20.42■□□□□ 0.86
Smarcc1P97496 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarcc1P97496 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.42■□□□□ 0.86
Smarcc1P97496 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcc1P97496 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.42■□□□□ 0.86
Smarcc1P97496 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.41■□□□□ 0.86
Smarcc1P97496 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smarcc1P97496 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcc1P97496 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc1P97496 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc1P97496 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smarcc1P97496 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.4■□□□□ 0.86
Smarcc1P97496 Auts2-212ENSMUST00000178555 309 ntBASIC20.4■□□□□ 0.86
Smarcc1P97496 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc1P97496 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc1P97496 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Smarcc1P97496 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcc1P97496 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc1P97496 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc1P97496 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.39■□□□□ 0.86
Smarcc1P97496 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcc1P97496 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.39■□□□□ 0.86
Smarcc1P97496 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.39■□□□□ 0.85
Smarcc1P97496 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Smarcc1P97496 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.39■□□□□ 0.85
Smarcc1P97496 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.39■□□□□ 0.85
Smarcc1P97496 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcc1P97496 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.39■□□□□ 0.85
Smarcc1P97496 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcc1P97496 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smarcc1P97496 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.38■□□□□ 0.85
Smarcc1P97496 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.38■□□□□ 0.85
Smarcc1P97496 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.38■□□□□ 0.85
Smarcc1P97496 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.38■□□□□ 0.85
Smarcc1P97496 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcc1P97496 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms