Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.78□□□□□ -0.2
Npas1P97459 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Gm42569-201ENSMUST00000200539 472 ntBASIC13.78□□□□□ -0.2
Npas1P97459 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.78□□□□□ -0.2
Npas1P97459 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.78□□□□□ -0.2
Npas1P97459 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Npas1P97459 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Npas1P97459 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Npas1P97459 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Npas1P97459 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.77□□□□□ -0.21
Npas1P97459 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Npas1P97459 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Npas1P97459 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Npas1P97459 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Npas1P97459 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Npas1P97459 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Npas1P97459 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Npas1P97459 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Npas1P97459 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.76□□□□□ -0.21
Npas1P97459 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Npas1P97459 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.76□□□□□ -0.21
Npas1P97459 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.76□□□□□ -0.21
Npas1P97459 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Npas1P97459 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.75□□□□□ -0.21
Npas1P97459 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Npas1P97459 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.75□□□□□ -0.21
Npas1P97459 Gm6576-201ENSMUST00000169678 883 ntBASIC13.75□□□□□ -0.21
Npas1P97459 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.75□□□□□ -0.21
Npas1P97459 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Npas1P97459 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Npas1P97459 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Npas1P97459 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Npas1P97459 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.75□□□□□ -0.21
Npas1P97459 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.75□□□□□ -0.21
Npas1P97459 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.75□□□□□ -0.21
Npas1P97459 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Npas1P97459 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Npas1P97459 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms