Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.57■□□□□ 0.88
Nkx2-3P97334 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-3P97334 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.56■□□□□ 0.88
Nkx2-3P97334 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gm14140-201ENSMUST00000119999 995 ntBASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gm12260-201ENSMUST00000122447 411 ntBASIC20.56■□□□□ 0.88
Nkx2-3P97334 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.56■□□□□ 0.88
Nkx2-3P97334 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-3P97334 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Gm18622-201ENSMUST00000219361 595 ntBASIC20.55■□□□□ 0.88
Nkx2-3P97334 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.55■□□□□ 0.88
Nkx2-3P97334 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-3P97334 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-3P97334 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.53■□□□□ 0.88
Nkx2-3P97334 Gm25911-201ENSMUST00000157621 56 ntBASIC20.53■□□□□ 0.88
Nkx2-3P97334 Gm9727-201ENSMUST00000161387 555 ntBASIC20.53■□□□□ 0.88
Nkx2-3P97334 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.53■□□□□ 0.88
Nkx2-3P97334 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-3P97334 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.52■□□□□ 0.88
Nkx2-3P97334 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Gm43575-201ENSMUST00000196420 516 ntBASIC20.52■□□□□ 0.88
Nkx2-3P97334 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-3P97334 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.52■□□□□ 0.87
Nkx2-3P97334 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nkx2-3P97334 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-3P97334 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms