Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim43cP86449 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim43cP86449 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.81■□□□□ 0.44
Trim43cP86449 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim43cP86449 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Trim43cP86449 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim43cP86449 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm29518-201ENSMUST00000190858 372 ntBASIC17.81■□□□□ 0.44
Trim43cP86449 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim43cP86449 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim43cP86449 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Trim43cP86449 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim43cP86449 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43cP86449 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim43cP86449 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim43cP86449 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43cP86449 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.79■□□□□ 0.44
Trim43cP86449 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43cP86449 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim43cP86449 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.79■□□□□ 0.44
Trim43cP86449 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Gm15794-201ENSMUST00000120182 631 ntBASIC17.78■□□□□ 0.44
Trim43cP86449 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Trim43cP86449 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.78■□□□□ 0.44
Trim43cP86449 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43cP86449 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms