Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SgcbP82349 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SgcbP82349 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.62□□□□□ -0.07
SgcbP82349 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SgcbP82349 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.61□□□□□ -0.07
SgcbP82349 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
SgcbP82349 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SgcbP82349 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.61□□□□□ -0.07
SgcbP82349 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.61□□□□□ -0.07
SgcbP82349 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SgcbP82349 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.61□□□□□ -0.07
SgcbP82349 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SgcbP82349 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
SgcbP82349 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.6□□□□□ -0.07
SgcbP82349 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SgcbP82349 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SgcbP82349 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SgcbP82349 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.6□□□□□ -0.07
SgcbP82349 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.6□□□□□ -0.07
SgcbP82349 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SgcbP82349 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SgcbP82349 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.59□□□□□ -0.07
SgcbP82349 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SgcbP82349 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.59□□□□□ -0.07
SgcbP82349 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.59□□□□□ -0.07
SgcbP82349 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SgcbP82349 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SgcbP82349 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.58□□□□□ -0.08
SgcbP82349 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.58□□□□□ -0.08
SgcbP82349 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.58□□□□□ -0.08
SgcbP82349 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SgcbP82349 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SgcbP82349 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.57□□□□□ -0.08
SgcbP82349 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SgcbP82349 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SgcbP82349 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms