Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CiitaP79621 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CiitaP79621 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.71■□□□□ 0.43
CiitaP79621 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.71■□□□□ 0.43
CiitaP79621 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CiitaP79621 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Gm27867-201ENSMUST00000184778 125 ntBASIC17.71■□□□□ 0.43
CiitaP79621 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CiitaP79621 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.71■□□□□ 0.43
CiitaP79621 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CiitaP79621 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CiitaP79621 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CiitaP79621 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CiitaP79621 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CiitaP79621 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.71■□□□□ 0.42
CiitaP79621 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CiitaP79621 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CiitaP79621 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.7■□□□□ 0.42
CiitaP79621 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CiitaP79621 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.7■□□□□ 0.42
CiitaP79621 Gm43347-201ENSMUST00000200226 580 ntBASIC17.7■□□□□ 0.42
CiitaP79621 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CiitaP79621 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CiitaP79621 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CiitaP79621 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Gm12644-201ENSMUST00000119935 606 ntBASIC17.69■□□□□ 0.42
CiitaP79621 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.69■□□□□ 0.42
CiitaP79621 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CiitaP79621 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CiitaP79621 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CiitaP79621 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CiitaP79621 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CiitaP79621 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CiitaP79621 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CiitaP79621 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.68■□□□□ 0.42
CiitaP79621 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.68■□□□□ 0.42
CiitaP79621 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.68■□□□□ 0.42
CiitaP79621 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CiitaP79621 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CiitaP79621 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.68■□□□□ 0.42
CiitaP79621 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CiitaP79621 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CiitaP79621 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CiitaP79621 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.67■□□□□ 0.42
CiitaP79621 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.67■□□□□ 0.42
CiitaP79621 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CiitaP79621 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms