Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Crnkl1P63154 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Crnkl1P63154 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Crnkl1P63154 Prob1-201ENSMUST00000097619 3021 ntBASIC16.25■□□□□ 0.19
Crnkl1P63154 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Gm11249-201ENSMUST00000117071 859 ntBASIC16.25■□□□□ 0.19
Crnkl1P63154 Gm13168-201ENSMUST00000121771 632 ntBASIC16.25■□□□□ 0.19
Crnkl1P63154 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.25■□□□□ 0.19
Crnkl1P63154 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Crnkl1P63154 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Crnkl1P63154 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Crnkl1P63154 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Crnkl1P63154 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.24■□□□□ 0.19
Crnkl1P63154 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Gm11927-201ENSMUST00000118472 759 ntBASIC16.24■□□□□ 0.19
Crnkl1P63154 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Crnkl1P63154 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Crnkl1P63154 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Crnkl1P63154 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.23■□□□□ 0.19
Crnkl1P63154 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Gm18666-201ENSMUST00000190039 958 ntBASIC16.23■□□□□ 0.19
Crnkl1P63154 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.23■□□□□ 0.19
Crnkl1P63154 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Zfp783-201ENSMUST00000095946 670 ntBASIC16.23■□□□□ 0.19
Crnkl1P63154 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.23■□□□□ 0.19
Crnkl1P63154 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Crnkl1P63154 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Crnkl1P63154 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Crnkl1P63154 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Gm22240-201ENSMUST00000175225 82 ntBASIC16.22■□□□□ 0.19
Crnkl1P63154 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Crnkl1P63154 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Crnkl1P63154 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Crnkl1P63154 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.21■□□□□ 0.19
Crnkl1P63154 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Crnkl1P63154 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms