Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.07■□□□□ 0.16
Lhx1P63006 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lhx1P63006 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lhx1P63006 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Gm7153-201ENSMUST00000117092 455 ntBASIC16.06■□□□□ 0.16
Lhx1P63006 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lhx1P63006 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.06■□□□□ 0.16
Lhx1P63006 Gm44454-201ENSMUST00000198541 138 ntBASIC16.06■□□□□ 0.16
Lhx1P63006 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx1P63006 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Lhx1P63006 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
Lhx1P63006 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.05■□□□□ 0.16
Lhx1P63006 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Lhx1P63006 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lhx1P63006 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.05■□□□□ 0.16
Lhx1P63006 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.05■□□□□ 0.16
Lhx1P63006 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.05■□□□□ 0.16
Lhx1P63006 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx1P63006 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Lhx1P63006 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lhx1P63006 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.04■□□□□ 0.16
Lhx1P63006 Gm27741-201ENSMUST00000185060 237 ntBASIC16.04■□□□□ 0.16
Lhx1P63006 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx1P63006 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lhx1P63006 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.03■□□□□ 0.16
Lhx1P63006 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lhx1P63006 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.03■□□□□ 0.16
Lhx1P63006 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.03■□□□□ 0.16
Lhx1P63006 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.03■□□□□ 0.16
Lhx1P63006 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Lhx1P63006 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lhx1P63006 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Lhx1P63006 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx1P63006 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx1P63006 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms