Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpl39P62892 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.73□□□□□ -0.53
Rpl39P62892 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Gm26571-201ENSMUST00000181399 666 ntBASIC11.73□□□□□ -0.53
Rpl39P62892 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Gm2559-201ENSMUST00000201323 363 ntBASIC11.73□□□□□ -0.53
Rpl39P62892 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.73□□□□□ -0.53
Rpl39P62892 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rpl39P62892 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.72□□□□□ -0.53
Rpl39P62892 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rpl39P62892 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Mir5133-201ENSMUST00000174955 77 ntBASIC11.72□□□□□ -0.53
Rpl39P62892 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl39P62892 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl39P62892 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Rpl39P62892 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rpl39P62892 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl39P62892 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Sybu-209ENSMUST00000228639 4113 ntBASIC11.71□□□□□ -0.53
Rpl39P62892 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.71□□□□□ -0.53
Rpl39P62892 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.71□□□□□ -0.53
Rpl39P62892 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.71□□□□□ -0.53
Rpl39P62892 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl39P62892 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rpl39P62892 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Rpl39P62892 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rpl39P62892 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl39P62892 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Rpl39P62892 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 Gm10849-201ENSMUST00000100397 618 ntBASIC11.7□□□□□ -0.54
Rpl39P62892 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpl39P62892 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpl39P62892 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl39P62892 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms