Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Lsm6P62313 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.36□□□□□ -0.11
Lsm6P62313 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.36□□□□□ -0.11
Lsm6P62313 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.36□□□□□ -0.11
Lsm6P62313 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lsm6P62313 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lsm6P62313 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Lsm6P62313 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Lsm6P62313 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.35□□□□□ -0.11
Lsm6P62313 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lsm6P62313 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lsm6P62313 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.35□□□□□ -0.11
Lsm6P62313 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Lsm6P62313 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Gm36967-201ENSMUST00000193814 266 ntBASIC14.35□□□□□ -0.11
Lsm6P62313 Gm18032-201ENSMUST00000222541 538 ntBASIC14.35□□□□□ -0.11
Lsm6P62313 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Lsm6P62313 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm6P62313 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm6P62313 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lsm6P62313 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lsm6P62313 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.34□□□□□ -0.11
Lsm6P62313 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Gm11355-201ENSMUST00000121120 306 ntBASIC14.34□□□□□ -0.11
Lsm6P62313 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.34□□□□□ -0.11
Lsm6P62313 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Lsm6P62313 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.34□□□□□ -0.11
Lsm6P62313 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lsm6P62313 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.34□□□□□ -0.11
Lsm6P62313 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm6P62313 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.33□□□□□ -0.11
Lsm6P62313 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm6P62313 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lsm6P62313 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.33□□□□□ -0.12
Lsm6P62313 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm6P62313 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.33□□□□□ -0.12
Lsm6P62313 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Lsm6P62313 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms