Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lsm3P62311 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lsm3P62311 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.03■□□□□ -0
Lsm3P62311 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.03■□□□□ -0
Lsm3P62311 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.03■□□□□ -0
Lsm3P62311 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.03■□□□□ -0
Lsm3P62311 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.03■□□□□ -0
Lsm3P62311 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Lsm3P62311 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.03■□□□□ -0
Lsm3P62311 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.02■□□□□ -0
Lsm3P62311 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Lsm3P62311 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lsm3P62311 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.02■□□□□ -0
Lsm3P62311 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.02■□□□□ -0
Lsm3P62311 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.02□□□□□ -0.01
Lsm3P62311 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.02□□□□□ -0.01
Lsm3P62311 App-207ENSMUST00000227737 2827 ntBASIC15.02□□□□□ -0.01
Lsm3P62311 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lsm3P62311 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Lsm3P62311 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Lsm3P62311 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
Lsm3P62311 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Lsm3P62311 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
Lsm3P62311 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.01□□□□□ -0.01
Lsm3P62311 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Lsm3P62311 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.01□□□□□ -0.01
Lsm3P62311 Zfp783-201ENSMUST00000095946 670 ntBASIC15.01□□□□□ -0.01
Lsm3P62311 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.01□□□□□ -0.01
Lsm3P62311 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.01□□□□□ -0.01
Lsm3P62311 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm3P62311 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.01□□□□□ -0.01
Lsm3P62311 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15□□□□□ -0.01
Lsm3P62311 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Gm10676-201ENSMUST00000098778 3221 ntBASIC15□□□□□ -0.01
Lsm3P62311 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15□□□□□ -0.01
Lsm3P62311 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm3P62311 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm3P62311 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm3P62311 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm3P62311 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms