Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Sec61a1P61620 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.46□□□□□ -0.09
Sec61a1P61620 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.46□□□□□ -0.09
Sec61a1P61620 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.46□□□□□ -0.09
Sec61a1P61620 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Sec61a1P61620 Gm9987-201ENSMUST00000069768 567 ntBASIC14.46□□□□□ -0.09
Sec61a1P61620 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.46□□□□□ -0.09
Sec61a1P61620 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sec61a1P61620 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.46□□□□□ -0.09
Sec61a1P61620 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a1P61620 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a1P61620 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a1P61620 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sec61a1P61620 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.45□□□□□ -0.1
Sec61a1P61620 Gm11539-201ENSMUST00000119837 557 ntBASIC14.45□□□□□ -0.1
Sec61a1P61620 Gm13436-201ENSMUST00000120418 567 ntBASIC14.45□□□□□ -0.1
Sec61a1P61620 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.45□□□□□ -0.1
Sec61a1P61620 Gm4974-201ENSMUST00000209974 875 ntBASIC14.45□□□□□ -0.1
Sec61a1P61620 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sec61a1P61620 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.45□□□□□ -0.1
Sec61a1P61620 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sec61a1P61620 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.44□□□□□ -0.1
Sec61a1P61620 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.44□□□□□ -0.1
Sec61a1P61620 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.44□□□□□ -0.1
Sec61a1P61620 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sec61a1P61620 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sec61a1P61620 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.43□□□□□ -0.1
Sec61a1P61620 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Sec61a1P61620 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a1P61620 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a1P61620 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sec61a1P61620 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.43□□□□□ -0.1
Sec61a1P61620 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sec61a1P61620 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sec61a1P61620 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms