Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.23■□□□□ 0.19
Atxn1P54254 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Atxn1P54254 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Atxn1P54254 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Atxn1P54254 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Atxn1P54254 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atxn1P54254 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atxn1P54254 Gm14057-201ENSMUST00000120631 482 ntBASIC16.22■□□□□ 0.19
Atxn1P54254 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.22■□□□□ 0.19
Atxn1P54254 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Atxn1P54254 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Atxn1P54254 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.22■□□□□ 0.19
Atxn1P54254 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.22■□□□□ 0.19
Atxn1P54254 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.22■□□□□ 0.19
Atxn1P54254 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atxn1P54254 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Atxn1P54254 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atxn1P54254 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Atxn1P54254 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.21■□□□□ 0.19
Atxn1P54254 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.21■□□□□ 0.19
Atxn1P54254 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.21■□□□□ 0.19
Atxn1P54254 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Atxn1P54254 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.21■□□□□ 0.19
Atxn1P54254 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.21■□□□□ 0.19
Atxn1P54254 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Atxn1P54254 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Atxn1P54254 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Atxn1P54254 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atxn1P54254 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.21■□□□□ 0.19
Atxn1P54254 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Atxn1P54254 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Atxn1P54254 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atxn1P54254 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atxn1P54254 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Atxn1P54254 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
Atxn1P54254 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atxn1P54254 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atxn1P54254 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.19■□□□□ 0.18
Atxn1P54254 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atxn1P54254 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atxn1P54254 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atxn1P54254 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atxn1P54254 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.19■□□□□ 0.18
Atxn1P54254 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.19■□□□□ 0.18
Atxn1P54254 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.19■□□□□ 0.18
Atxn1P54254 Gm13312-201ENSMUST00000119631 718 ntBASIC16.19■□□□□ 0.18
Atxn1P54254 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.19■□□□□ 0.18
Atxn1P54254 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.19■□□□□ 0.18
Atxn1P54254 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.19■□□□□ 0.18
Atxn1P54254 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.19■□□□□ 0.18
Atxn1P54254 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Atxn1P54254 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.19■□□□□ 0.18
Atxn1P54254 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms