Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Sox3P53784 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Sox3P53784 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Sox3P53784 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox3P53784 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.64■□□□□ 0.09
Sox3P53784 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.64■□□□□ 0.09
Sox3P53784 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.64■□□□□ 0.09
Sox3P53784 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.64■□□□□ 0.09
Sox3P53784 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Sox3P53784 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox3P53784 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox3P53784 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox3P53784 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox3P53784 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Gm10052-201ENSMUST00000168019 960 ntBASIC15.63■□□□□ 0.09
Sox3P53784 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.63■□□□□ 0.09
Sox3P53784 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.63■□□□□ 0.09
Sox3P53784 Gm7729-201ENSMUST00000050143 801 ntBASIC15.63■□□□□ 0.09
Sox3P53784 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.63■□□□□ 0.09
Sox3P53784 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox3P53784 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Sox3P53784 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Sox3P53784 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Sox3P53784 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Sox3P53784 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Actl10-202ENSMUST00000226583 1501 ntBASIC15.63■□□□□ 0.09
Sox3P53784 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox3P53784 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.62■□□□□ 0.09
Sox3P53784 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Gm10418-201ENSMUST00000100943 576 ntBASIC15.62■□□□□ 0.09
Sox3P53784 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Sox3P53784 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.62■□□□□ 0.09
Sox3P53784 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Gm2651-201ENSMUST00000203560 838 ntBASIC15.62■□□□□ 0.09
Sox3P53784 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.62■□□□□ 0.09
Sox3P53784 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sox3P53784 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.62■□□□□ 0.09
Sox3P53784 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sox3P53784 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox3P53784 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sox3P53784 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox3P53784 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Sox3P53784 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Sox3P53784 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.61■□□□□ 0.09
Sox3P53784 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.61■□□□□ 0.09
Sox3P53784 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.61■□□□□ 0.09
Sox3P53784 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.61■□□□□ 0.09
Sox3P53784 Gm37025-201ENSMUST00000195159 829 ntBASIC15.61■□□□□ 0.09
Sox3P53784 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms