Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pdx1P52946 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Pdx1P52946 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pdx1P52946 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Pdx1P52946 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pdx1P52946 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Pdx1P52946 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdx1P52946 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pdx1P52946 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdx1P52946 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
Pdx1P52946 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Gm11950-201ENSMUST00000121615 838 ntBASIC16.2■□□□□ 0.18
Pdx1P52946 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pdx1P52946 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.2■□□□□ 0.18
Pdx1P52946 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.2■□□□□ 0.18
Pdx1P52946 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pdx1P52946 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pdx1P52946 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.19■□□□□ 0.18
Pdx1P52946 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pdx1P52946 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.19■□□□□ 0.18
Pdx1P52946 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pdx1P52946 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.19■□□□□ 0.18
Pdx1P52946 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Pdx1P52946 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pdx1P52946 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Pdx1P52946 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pdx1P52946 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.18■□□□□ 0.18
Pdx1P52946 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pdx1P52946 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Pdx1P52946 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pdx1P52946 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms