Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.03■□□□□ -0
Nkx2-2P42586 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.03■□□□□ -0
Nkx2-2P42586 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.03■□□□□ -0
Nkx2-2P42586 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Nkx2-2P42586 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Nkx2-2P42586 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.02■□□□□ -0
Nkx2-2P42586 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.02■□□□□ -0
Nkx2-2P42586 Gm6623-201ENSMUST00000173570 544 ntBASIC15.02■□□□□ -0
Nkx2-2P42586 Gm6345-202ENSMUST00000180900 204 ntBASIC15.02■□□□□ -0
Nkx2-2P42586 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-2P42586 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.02□□□□□ -0.01
Nkx2-2P42586 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-2P42586 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.01□□□□□ -0.01
Nkx2-2P42586 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.01□□□□□ -0.01
Nkx2-2P42586 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-2P42586 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-2P42586 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-2P42586 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-2P42586 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 AA414768-201ENSMUST00000121924 1257 ntBASIC15□□□□□ -0.01
Nkx2-2P42586 Gm10052-201ENSMUST00000168019 960 ntBASIC15□□□□□ -0.01
Nkx2-2P42586 Gm44430-201ENSMUST00000203376 995 ntBASIC15□□□□□ -0.01
Nkx2-2P42586 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15□□□□□ -0.01
Nkx2-2P42586 Gm7729-201ENSMUST00000050143 801 ntBASIC15□□□□□ -0.01
Nkx2-2P42586 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-2P42586 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms