Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LdlrP35951 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.31■□□□□ 0.2
LdlrP35951 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.31■□□□□ 0.2
LdlrP35951 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.31■□□□□ 0.2
LdlrP35951 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LdlrP35951 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.3■□□□□ 0.2
LdlrP35951 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.3■□□□□ 0.2
LdlrP35951 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.3■□□□□ 0.2
LdlrP35951 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.3■□□□□ 0.2
LdlrP35951 Gm18959-201ENSMUST00000208954 655 ntBASIC16.3■□□□□ 0.2
LdlrP35951 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.3■□□□□ 0.2
LdlrP35951 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LdlrP35951 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LdlrP35951 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.29■□□□□ 0.2
LdlrP35951 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
LdlrP35951 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LdlrP35951 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LdlrP35951 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LdlrP35951 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
LdlrP35951 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LdlrP35951 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
LdlrP35951 Gm10013-201ENSMUST00000106074 672 ntBASIC16.28■□□□□ 0.2
LdlrP35951 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Gm6345-202ENSMUST00000180900 204 ntBASIC16.28■□□□□ 0.2
LdlrP35951 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LdlrP35951 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LdlrP35951 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LdlrP35951 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LdlrP35951 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LdlrP35951 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LdlrP35951 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.27■□□□□ 0.2
LdlrP35951 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
LdlrP35951 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.27■□□□□ 0.2
LdlrP35951 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
LdlrP35951 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LdlrP35951 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms