Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.15■□□□□ 0.02
Foxa1P35582 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Foxa1P35582 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Foxa1P35582 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.14■□□□□ 0.01
Foxa1P35582 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.14■□□□□ 0.01
Foxa1P35582 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Foxa1P35582 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Foxa1P35582 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Foxa1P35582 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Foxa1P35582 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Foxa1P35582 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Foxa1P35582 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Foxa1P35582 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Foxa1P35582 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Foxa1P35582 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Foxa1P35582 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.13■□□□□ 0.01
Foxa1P35582 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Foxa1P35582 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.13■□□□□ 0.01
Foxa1P35582 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Foxa1P35582 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Foxa1P35582 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Foxa1P35582 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Foxa1P35582 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Foxa1P35582 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Foxa1P35582 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Foxa1P35582 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.12■□□□□ 0.01
Foxa1P35582 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.12■□□□□ 0.01
Foxa1P35582 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.12■□□□□ 0.01
Foxa1P35582 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Foxa1P35582 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Foxa1P35582 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Foxa1P35582 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms