Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mmp13P33435 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
Mmp13P33435 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Mmp13P33435 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Mmp13P33435 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.77■□□□□ 0.27
Mmp13P33435 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.77■□□□□ 0.27
Mmp13P33435 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.77■□□□□ 0.27
Mmp13P33435 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp13P33435 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm10231-201ENSMUST00000181584 441 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm10175-202ENSMUST00000208752 441 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp13P33435 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.75■□□□□ 0.27
Mmp13P33435 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.75■□□□□ 0.27
Mmp13P33435 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Mmp13P33435 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Mmp13P33435 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Mir5130-201ENSMUST00000175160 84 ntBASIC16.75■□□□□ 0.27
Mmp13P33435 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.75■□□□□ 0.27
Mmp13P33435 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mmp13P33435 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.75■□□□□ 0.27
Mmp13P33435 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms