Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mmp13P33435 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mmp13P33435 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.78■□□□□ 0.28
Mmp13P33435 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Mmp13P33435 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Mmp13P33435 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Mmp13P33435 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mmp13P33435 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mmp13P33435 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.77■□□□□ 0.28
Mmp13P33435 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.77■□□□□ 0.27
Mmp13P33435 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.77■□□□□ 0.27
Mmp13P33435 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.77■□□□□ 0.27
Mmp13P33435 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Mmp13P33435 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp13P33435 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm10231-201ENSMUST00000181584 441 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Gm10175-202ENSMUST00000208752 441 ntBASIC16.76■□□□□ 0.27
Mmp13P33435 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mmp13P33435 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mmp13P33435 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.75■□□□□ 0.27
Mmp13P33435 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.75■□□□□ 0.27
Mmp13P33435 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Mmp13P33435 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Mmp13P33435 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Mir5130-201ENSMUST00000175160 84 ntBASIC16.75■□□□□ 0.27
Mmp13P33435 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.75■□□□□ 0.27
Mmp13P33435 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Mmp13P33435 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mmp13P33435 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.75■□□□□ 0.27
Mmp13P33435 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mmp13P33435 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms